Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906577.1_cds_XP_016456714.1_50524
CDS Infomation

[gene=LOC107780665] [db_xref=GeneID:107780665] [protein=protein FAM63A-like] [protein_id=XP_016456714.1] [location=join(72210..72372,76661..76779,76907..77013,77144..77231,77628..78627,78828..78882,78987..79068,79208..79288,82133..82237,82321..82370,82998..83127,83318..83395)] [gbkey=CDS]
Sequence

ATGGATTCTGCAATACCCGCTTCTCAATCGGAAGAGGGGAAGCGAGAGGAGGAGGCAGAA
CCCAAAGAAATGGCGCACAAGACTAAGGTTATTCAATTCTTGGGCCGAACCACACCAATT
ATTCTCCAAAACGACAATGGCCCATGTCCACTCCTTGCTATCTGTAACGTGCTATTGTTG
AAGAACAACTTGAACTTGAGTCCTGATATTCCTGAGGTTTCACAGGAGAAATTGCTTTCT
CTTGTTGCTGAGCGGCTGATAGATTCAAACAGTAATGTCAATGACAAAGATGAAGGGTAT
GTAGAAAATCAGCAACAGAATATTGCTGATGCAATTGATTTGCTTCCTAGACTTGCCACT
GGTATTGATGTAAATATAAAATTCAGGAGAATTGATGACTTTGAGTTCACTCGTGAATGT
GCAATATTTGATCTTTTGGATATTCCACTTTATCACGGTTGGATAGTTGATCCACAGGAT
CATGATACTGCAAATGCAATTGGATCAAAGTCGTATAATACTTTGATGGGGGAGCTTGTT
GCCCTTGAAACCCAAAATATGGACACTGGGAATAAGAAAAATTCTGAAGATGATGATGTT
GATTTTGCTGCTGCTACAACTGCAGCACTAGGGGTACCTTCTCCATGCCTTTCGAGAGGG
AGATCATTTGAAGATTCTCCTGTTTCTATTACCGATAACCATACAGCCAGAAAAGGAGAT
ATTGAAGAAGAAGCAGAGCTGTTGAGAGCCCTTCAATTATCTGAAACTTCATTAGTAGAA
ACTGATGGACTGAATTCCTTAGGTGAGATAGCAAATCTAAAGTGTCCAGAGCCGATGGTT
CCTACCAAGACTTCAGAAGGAAATGATATTGAGACGACACAACCAGTTTTGCAGCATGAA
GCATTGATACCCACAGAAGTATTAGTATCTAACGATAGAGATCCAAATAGTTCCCAAATA
GTCTCCGGAGCAGCGATTAATTCATCCCTGAAAATTGATCAGGAAACCCCTTCCCAAGAA
CTTGGAAATGCAAAACTGCTGGCTGAAAATGAGAGTGTACCTCTTGAGTCAGGACAAGTT
TCTTCATCTGCTTGTGAAAATCATGAGCATCTTTTTGGAGGTATGAATGGCATTCAGGGA
ACACACACTATTGCTGGAAATGCGAATGCAGCTGAACCTAATCATCAAGTTGGTTGTGAT
GCGTTTGATTCATCTAGTTCCTCAATACCATCTGCAGTCTCAGATTCATCGGGTGGCAGA
CGACATGACACAGATGAACCTGAAACCTTTAATTCTTCCATCGATGATGATGAGCCCATT
TATGAAGGAGAGGATTGCATATTGGAGTCAGCAACCACCAGTTACCAAAGTCGAGAGCCT
ATGTATGAAGGTGAGGTGGTTCTTGCTGAACAAGTGAATGGAGGCAGTACAGATGTGCCT
GAGACAATTGTGAAGGATGAAATCACACAGAGAGAAGGGGAACTGGTGAGGAACTTTCTG
AAGAACAGTGCAAGCCAATTAACAATCTTTGGATTATTTTCCTTGCAAGAGGGTTTGAAA
GAGCGGGAACTTTGTGTTTTCTTCAGGAATAATCATTTCAACACCATGTTTAAGTTTGAA
GGCGAACTATATATTTTGGCCACTGACCAGGGATATATAAATCAGTCTGATTTAGTATGG
GAGAAACTCAATGAGGTTAATGGAGACACGATATATGTGACTGGAAACTTCAAGGAGTTC
AAGGTCGAAGATAATTCCAACACCACATGGGATCAACGGAGTGCTATGGCCAGTACTGCA
GACTATCTGGCAAACATGGACAATTCAGGACAAGGACATCCAACTTTCAATTCTGATTTA
CAATTGGCAATAGCTCTTCAGCAACAGGAATTTGAGCAACAGCAACAGGCACCACAGAGA
AATCAAAACCCCCAACAACAAGCTGTAAATGGTGCGTCGAGATTGATTACTGGTCCTCAG
GTACCAAGGAGCAAACCTACATCTTCGTCAGCCAGGCCGGAGCCAAAGTCATCAAAAGAC
AAGTGTATTGTGATGTAA

Peptide Sequence

PEP ID

XP_016456714.1
PEP Infomation

PREDICTED: protein FAM63A-like [Nicotiana tabacum]
Sequence

MDSAIPASQSEEGKREEEAEPKEMAHKTKVIQFLGRTTPIILQNDNGPCPLLAICNVLLL
KNNLNLSPDIPEVSQEKLLSLVAERLIDSNSNVNDKDEGYVENQQQNIADAIDLLPRLAT
GIDVNIKFRRIDDFEFTRECAIFDLLDIPLYHGWIVDPQDHDTANAIGSKSYNTLMGELV
ALETQNMDTGNKKNSEDDDVDFAAATTAALGVPSPCLSRGRSFEDSPVSITDNHTARKGD
IEEEAELLRALQLSETSLVETDGLNSLGEIANLKCPEPMVPTKTSEGNDIETTQPVLQHE
ALIPTEVLVSNDRDPNSSQIVSGAAINSSLKIDQETPSQELGNAKLLAENESVPLESGQV
SSSACENHEHLFGGMNGIQGTHTIAGNANAAEPNHQVGCDAFDSSSSSIPSAVSDSSGGR
RHDTDEPETFNSSIDDDEPIYEGEDCILESATTSYQSREPMYEGEVVLAEQVNGGSTDVP
ETIVKDEITQREGELVRNFLKNSASQLTIFGLFSLQEGLKERELCVFFRNNHFNTMFKFE
GELYILATDQGYINQSDLVWEKLNEVNGDTIYVTGNFKEFKVEDNSNTTWDQRSAMASTA
DYLANMDNSGQGHPTFNSDLQLAIALQQQEFEQQQQAPQRNQNPQQQAVNGASRLITGPQ
VPRSKPTSSSARPEPKSSKDKCIVM

Transcript Sequence

Gene sequence data has not been registered.